BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003D12SP1|AL425125
(1007 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1395 1155 0.0
>3x_Contig1395
Length = 6688
Score = 1155 bits (582), Expect = 0.0
Identities = 623/632 (98%), Gaps = 6/632 (0%)
Strand = Plus / Minus
Query: 1 gatctataatcgaattctgaacaaaaaccgatggttttaaagggactatattaaggaata 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 647 gatctataatcgaattctgaacaaaaaccgatggttttaaagggactatattaaggaa-a 589
Query: 61 tcagtgctcgaatatgttatgtgtcgataggctttgtaacatagaatgacctagatgtta 120
||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 588 tcagtgc-cgaatatgtagtg---cgataggctttgtaacatagaatgacctagatgtta 533
Query: 121 tgttagagagattattccgttctatcataaaagatgattttttatatgtatagttattgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tgttagagagattattccgttctatcataaaagatgattttttatatgtatagttattgt 473
Query: 181 ctctgaataaattaaatgctatatgtaggtgacacatgtcaggacactgattcagaatca 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 472 ctctgaataaattaaatgctata-gtaggtgacacatgtcaggacactgattcagaatca 414
Query: 241 gttacgcgctgatgagataaccatattcctgatttcgtacatgtatgatttgtcatttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gttacgcgctgatgagataaccatattcctgatttcgtacatgtatgatttgtcatttaa 354
Query: 301 actggtatgtgactggtctgcggaaccagtgtctctagatttatcaccaagaatgaacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 actggtatgtgactggtctgcggaaccagtgtctctagatttatcaccaagaatgaacca 294
Query: 361 tccacctaccttcctgctccatttattctcttcatggtaaaacttctctaattgtttgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tccacctaccttcctgctccatttattctcttcatggtaaaacttctctaattgtttgct 234
Query: 421 tgtaatttggtacgtaggatctgtggttgagtttgtagtcaaagagtggaatcgtgtgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tgtaatttggtacgtaggatctgtggttgagtttgtagtcaaagagtggaatcgtgtgga 174
Query: 481 ttctgaagagataaatctatttccatgctcatctcttccgaacggcagtcgagactgtga 540
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 173 ttctgaagagataaatctatttccatgctcatctcttccgaacggcagttgagactgtga 114
Query: 541 tcgaagaatgttaccagaatgtccttgtgattggaatttgacgttcttggtaggtgaaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 tcgaagaatgttaccagaatgtccttgtgattggaatttgacgttcttggtaggtgaaga 54
Query: 601 ttgagatcttggcatcaagtctgtgataccat 632
||||||||||||||||||||||||||||||||
Sbjct: 53 ttgagatcttggcatcaagtctgtgataccat 22
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7674
Number of Sequences: 1807
Number of extensions: 7674
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 1007
length of database: 10,358,551
effective HSP length: 16
effective length of query: 991
effective length of database: 10,329,639
effective search space: 10236672249
effective search space used: 10236672249
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)